miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|161488435|gb|EX198195.1|EX198195 GTTTTAAATAATAACTCTGGCCAAATGGAAATATATGATGCTGAGTTGTTTAACATGCAACCAGTGTTTTCAGATGACTT
GAAAGATCACGAAACTACGTTAGGAAATCAGACCAAATCTTACAGAGATCAGGTGGACTTCTGCATTGAGGCCTTTGGGA
CCACCAAACAGAAGCGAGCTCTGAGCTCCAGAAGAATGAACAAAGTTGGCAGTGAAACTTTAAACATAGCTGTGGCCAGA
GCAGCTGAAAATATCATAGATGAAAAAGGGGTCACTGGTAAAACTACAGCCACTTTGAAACTCACTCCTCTTTTCTTAAA
GATTATTTTCTTGATCCATATAAGTTGTGTTCTGTATTTCACTGTTTATGTAATGACACTTCATCTTATGTGGAGGACTT
GACTGAACTGAGTCATTGAAGTTTAGAGCAAAGACAGTAACACTTCTGGGGGTTATAATCTGGATAGTGAAATTATTTCA
TTTTTGGAGAAATATCTAGTCTGGGGTATCCTTAAATCTTTGGGTGGTCCTGAGTTCCAAGTAATAGTGAGTATAGGGGT
CTAGCTAAATGAAATAATTTCATTGTATTCTTACTTCAGCATGGATTTCTTTCTTGAAAAGCTCTTGTTAATGATGCGGC
CCAAGATGACCTACAAGATGAATCTGCCTACCTGCCCCCATGCCATGCTGATGGTGTCAAGCCAGAGGAAAATTATAAAT
TT




Most similar to sp|Q9GZS1|RPA49_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9GZS1|RPA49_HUMAN DNA-directed RNA polymerase I subunit RPA49
           OS=Homo sapiens GN=POLR1E PE=1 SV=2
          Length = 481

 Score =  132 bits (331), Expect = 3e-30
 Identities = 64/92 (69%), Positives = 79/92 (85%)
 Frame = +1

Query: 1   VLNNNSGQMEIYDAELFNMQPVFSDDLKDHETTLGNQTKSYRDQVDFCIEAFGTTKQKRA 180
           +LN  SGQME+YDAELFNMQP+FSD   + E  L +QTK+YR+++D CIEAFGTTKQKRA
Sbjct: 153 ILNKTSGQMEVYDAELFNMQPLFSDVSVESELALESQTKTYREKMDSCIEAFGTTKQKRA 212

Query: 181 LSSRRMNKVGSETLNIAVARAAENIIDEKGVT 276
           L++RRMN+VG+E+LN AVA+AAE IID KGVT
Sbjct: 213 LNTRRMNRVGNESLNRAVAKAAETIIDTKGVT 244